Quick Answers: You pay both an EMD in tender and a security deposit at different stages of the same GeM bid. The EMD is a submission-stage deposit that proves serious intent, since it goes in before evaluation even starts. The security deposit, also called performance security, is a post-award deposit that guarantees contract execution because it covers the buyer if the winning seller does not deliver. Losing bidders get the EMD back after the award. The winning bidder's EMD gets adjusted against the security deposit or refunded once that security is in place
Every EMD in tender question splits into two payments that look similar because both are refundable, both go to the same buyer, both sit as compliance checks on the same contract. Yet they serve entirely different purposes at entirely different stages. The Earnest Money Deposit sits at the submission stage, since it filters out frivolous bids before evaluation begins. The security deposit sits at the post-award stage, because it guarantees that the winning seller will execute the contract as promised. Sellers walking through the 11-stage GeM bidding process for the first time often confuse the two, which leads to bids that miss one payment or misread the other.
Understanding the difference between earnest money deposit and security deposit matters because the two payments have different sizes, different timings, different consequences if they go wrong. An EMD in tender that is short by even one paise gets the bid rejected before evaluation, while a security deposit issue after award can lead to contract cancellation or forfeiture of the entire security amount. Sellers reading the tender document on Day 1 catch both requirements early, which prevents the surprise cost that shows up when a seller assumes the EMD covers everything.
What is EMD in a Tender and When You Pay It
The EMD in tender is the refundable amount you submit with the bid to show serious intent. It goes in before the buyer opens technical bids, which means it acts as a filter that removes frivolous participants before real evaluation begins.
Key features of the EMD
- When paid: at the bid submission stage, before the buyer opens any envelope.
- Amount: two to five percent of the estimated bid value under GFR 2017, since the exact figure sits in the tender document.
- Instrument: NEFT/RTGS, Demand Draft, Bank Guarantee, plus Fixed Deposit Receipt as the tender specifies.
- Refund: unsuccessful bidders get it back within a few weeks of the award notification.
- Purpose: filter out non-serious bidders, since the deposit puts real money behind the seller's intent.
Since the EMD is a compliance gate at the submission stage, a wrong amount or wrong instrument gets the bid rejected immediately, which is why sellers building a tender document checklist put the deposit clause reading at the top of the list.
What a Security Deposit Is and Why You Only Pay It if You Win
A security deposit sits on the opposite side of the EMD in tender timeline, because it is the larger amount the winning bidder posts to guarantee contract execution. Because the EMD alone is not big enough to cover the buyer's risk on a large contract, the security deposit steps in once the seller has won and the actual delivery work begins.
Key features of the security deposit
- When paid: after the award notification, before the contract is signed.
- Amount: usually five to ten percent of the contract value, since it needs to cover the buyer's risk if the seller defaults on delivery.
- Instrument: Bank Guarantee from a scheduled bank is the most common form, though some tenders accept Demand Draft or Fixed Deposit.
- Validity: covers the contract period plus a warranty tail that the tender specifies.
- Purpose: guarantees contract execution, since the buyer can encash the security if the seller fails to deliver.
The security deposit is where the EMD in tender relationship changes for the winning bidder, because the earnest money and security deposit relationship actually connects, because the buyer either adjusts the winning bidder's EMD against the security deposit or refunds the EMD after the security is in place. This is spelled out in EMD in tender payment guidance that every seller should read before the first bid.

EMD Versus Security Deposit: The Side-by-Side Difference
Even though both payments are refundable while both go to the same buyer, the two differ on almost every practical point that matters to an MSME. Understanding the difference between earnest money deposit and security deposit on the same EMD in a tender situation helps the seller plan the working capital that will be committed over the contract cycle. The EMD in tender side sits at submission, since the security deposit side sits at award.
Dimension
EMD
Security Deposit
Timing
Paid at bid submission, since it filters non-serious bidders.
Paid after award, because it guarantees contract execution.
Amount
Two to five percent of estimated bid value.
Usually five to ten percent of the contract value, which is larger than the EMD in absolute terms.
Instrument
Online transfer, Demand Draft, Banker’s Cheque, plus Bank Guarantee for larger amounts.
Usually Bank Guarantee since the amount is larger while the validity period is longer.
Refund
Refunded to losing bidders within weeks of award, since the compliance function ends once the award is decided.
Released after contract completion plus the warranty tail, because the buyer needs the cover throughout execution.
The security deposit is the larger commitment, which is why sellers reading QCBS tender evaluation also read the security deposit percentage before committing to the bid. A generous EMD in tender refund can still leave the seller short on working capital if the security deposit is heavy and the delivery timeline is long.
How the Two Deposits Connect on the Winning Bid
On the winning bid, the EMD in tender does not simply disappear or vanish into the buyer's account. Because the security deposit needs to be posted before the contract can be signed, the buyer usually gives the winning bidder one of two options for the EMD amount.
Option one: Adjustment against security deposit
The buyer applies the EMD in tender amount toward the security deposit, which means the seller only tops up the difference. Since the security deposit is usually five to ten percent of the contract value and the EMD was two to five percent of the estimated value, the top-up is the remainder. This is the most working-capital-friendly path, since it avoids doubling the deposit lockup at the award stage.
Option two: Full refund plus fresh security
The buyer refunds the EMD in full once the security deposit is posted separately. This is a cleaner accounting path, though it needs the seller to arrange the full security deposit as a fresh transaction, which is why sellers managing tender workflows in 7 steps plan the cash flow for both possibilities before submitting.
Common Confusion Points on EMD Versus Security Deposit
Three confusion patterns show up most often when MSMEs read the EMD in tender clause, which each lead to preventable errors before or after the award.
Confusion one: Assuming they are the same payment
Sellers new to the EMD in tender framework sometimes assume the security deposit and earnest money are labels for the same thing. Because both are refundable, both go to the same buyer, the confusion is understandable, though the practical difference in size, timing, plus instrument means treating them as one payment leads to missed compliance on either the submission stage or the post-award stage.
Confusion two: Missing the security deposit deadline
The security deposit has its own deadline after the award notification, which is often shorter than the EMD in tender window that sellers are used to. Missing this deadline can lead to the award being withdrawn, since the buyer treats the missed security as evidence that the seller cannot honour the contract. This is one of the five conditions that forfeit the EMD entirely.
Confusion three: Wrong instrument for the security deposit
An EMD in tender paid by NEFT does not mean the security deposit can also be paid by NEFT. Because the security deposit is larger and covers a longer period, most buyers ask for a Bank Guarantee valid for the contract term plus warranty tail. Sellers avoiding the 9 common bidding mistakes arrange the security deposit instrument in advance, since scheduled bank BGs take three to five working days to issue.
How ClearBid Shows Both Deposits Before You Commit to the Bid
ClearBid's Tender Summary reads the uploaded GeM tender then lists Key dates, Scope of work or supply, Eligibility criteria, Documents required on one page. The EMD in tender clauses and security deposit clauses appear together, which means the seller sees both commitments before committing to the bid.
- EMD figure: percentage, accepted instrument, submission deadline.
- Security deposit terms: percentage of contract value, accepted instrument, validity period.
- Adjustment rule: whether the winning bid gets EMD adjusted against security or refunded separately.
- Documents required: the certificates the buyer wants for both deposits.
Since both payments impact working capital, the seller can plan the EMD in auction working capital alongside the security deposit exposure before pricing the bid. This is the difference between a bid that wins and a bid that becomes unprofitable at execution.
Conclusion
The EMD in tender and the security deposit are two different payments on the same GeM bid. Because the EMD sits at the submission stage while the security deposit sits at the post-award stage, they solve different buyer risks and carry different working-capital implications.
- EMD: two to five percent of estimated value, paid at submission, refunded to losing bidders after award.
- Security deposit: five to ten percent of contract value, paid after award, released after contract completion plus warranty.
- Winning bid: EMD either adjusts against security deposit or gets refunded once security is posted.
Reading the EMD in tender clause and the security deposit clause on Day 1 tells the seller the full working-capital picture, since committing to a bid without knowing the security deposit terms is committing blind to the larger of the two commitments.
ClearBid's Tender Summary shows both the EMD and security deposit clauses on one page, since Documents required and Eligibility criteria surface together for every GeM tender. Register on ClearBid today to read both deposits before you commit working capital on any bid.
Frequently Asked Questions
Q1. What is the difference between earnest money deposit and security deposit on a GeM tender?
The difference between earnest money deposit and security deposit is timing and purpose. The EMD is paid at bid submission because it filters non-serious bidders before evaluation. The security deposit is paid after award because it guarantees contract execution. The EMD is two to five percent of estimated value, while the security deposit is five to ten percent of contract value.
Q2. When does an MSME pay earnest money and security deposit on the same GeM tender?
An MSME pays the earnest money and security deposit at two different stages of the same GeM tender. The EMD goes in at submission because it is a compliance gate before evaluation. The security deposit is posted after the seller wins the bid because it guarantees the contract will be delivered. Losing bidders never pay the security deposit, since the EMD in tender cycle ends for them at the award notification stage.
Q3. Does the security deposit and earnest money have the same instrument on GeM tenders?
The security deposit and earnest money usually take different instruments on GeM tenders. The EMD can be paid through NEFT, Demand Draft, Banker's Cheque, plus Bank Guarantee. The security deposit is usually a Bank Guarantee since the amount is larger and the validity is longer, though the tender document confirms the exact instruments allowed for each.
Q4. What happens to the EMD in tender for the winning bidder on a GeM contract?
The EMD in tender for the winning bidder is either adjusted against the security deposit or refunded once the security deposit is in place. The buyer's terms in the tender document confirm which option applies. Adjustment is the more working-capital-friendly path since it avoids doubling the lockup at the award stage.
Q5. Can an MSME lose the EMD in tender by missing the security deposit deadline after winning?
An MSME can lose the EMD in tender by missing the security deposit deadline after winning. Failing to submit the performance security after award is one of the five conditions that forfeit the EMD entirely, since the buyer treats the missed security as evidence that the seller cannot honour the contract.
Q6. How large is the security deposit compared to the EMD in tender on a typical GeM bid?
The security deposit is usually two to three times larger than the EMD in tender on the same GeM bid. The EMD sits at two to five percent of estimated bid value under GFR 2017, while the security deposit sits at five to ten percent of the actual contract value. The absolute cash commitment on the security deposit is meaningfully bigger.
Q7. How does ClearBid help an MSME plan the EMD in tender and security deposit together?
ClearBid's Tender Summary reads the uploaded GeM tender then lists Key dates, Scope of work, Eligibility criteria, Documents required on one page. The deposit-related clauses appear together, which means the seller sees the EMD in tender figure and the security deposit terms before committing to the bid. The eligibility check also flags MSE exemption on the EMD.



